The Division of Biostatistics offers degrees in biostatistics, epidemiology, public health data science and molecular epidemiology, and is home to researchers working on ground-breaking studies in this evolving field.
The Division of Biostatistics offers the following software for download:
Prune a list of SNPs that are in high linkage disequilibrium (LD) with other SNPs in the list, while preferentially keeping/selecting SNPs of higher priority (e.g., the most significant SNPs in a genome-wide association study).
An extension to the existing open-source software Haploview, which uses pairwise r2 linkage disequilibrium between single nucleotide polymorphisms (SNPs) to select tagSNPs.
rAggr finds proxy markers (SNPs and indels) that are in linkage-disequilibrium (LD) with a set of queried markers, using the 1000 Genomes Project and HapMap genotype databases.
Permutation-based FDR Point and Confidence Interval Estimation
Causal Inference Test
Bayesian Variant Selection